Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846569.1_cds_XP_016509716.1_22624
CDS Infomation

[gene=LOC107827150] [db_xref=GeneID:107827150] [protein=autophagy-related protein 18a-like] [protein_id=XP_016509716.1] [location=join(18893..19819,20779..20986,22408..22534,22680..22770)] [gbkey=CDS]
Sequence

ATGACCTCTGCCCTCCCTTCCTCCTCCCCTTGGCCCGATTCCAACCCTTTCGTTTCCCCT
CACATGTCGGAAAATTCACCTCAGGCTCTAGAATCCGGTGATCGTTCCTTTCTATCTGAC
CTCTCCGATATCTCCTCCGCCATCACTGCCGCCACAGCTGATGATGATGAACACCGCGCT
GAAACCTCCGTTACCTCCCCTGCTGCCGCCGCTACTACTACTACCGTACAAAATATTAAC
CCTAATCCTACTTCAATTTCTCTTCCCGTTGATTCTTCTACACCGAATATCCTTTACCTC
TCCTTCAACCAGGATCACGGTTGCTTTGCGGCGGGCACCGATCGCGGGTTCCGGATCTAC
AACTGCGACCCGCTTCGCGAGATTTTCCGCCGCGATTTTGCCGGTAATGCTAATGGCGGA
GGTGGAATTTGTGTTGTTCAGATGCTTTTTCGATGCAATATTCTGGCGTTGGTTGGAGGT
GGCCCGGAACCTCAATATCCTTTAAACAAGGTGATGATATGGGATGATCATCAATCCAGG
TGCATCGGCGAGCTGTCGTTTCGATCCGAGGTGAAATCCGTGAGGCTAAGAAGGGATAGA
ATTGTGGTTGTTTTAGCTCAGAAGATATTTGTTTACAACTTTGCGGATTTGAAGCTGTTA
CATCAGATTGAGACGGTGGCAAATCCTAAGGGTTTGTGTGAGGTGTCACAGGTATCGGGA
TCGATGGTTCTGGTTTGTCCGGGGCTGCAGAAGGGTCAGGTGAGAGTGGAGCATTACGCG
TCGAAGAGGACCAAGTTTATAATGGCACATGACTCGAGGACTGTGTGTTTTGCGCTCACA
AATGATGGGAGGTTACTGGCTACTGCTAGCAGTAAGGGTACTCTTGTCAGAGTGTTCAAT
ACTTTAGATGGATCTTTGGTCCAAGAGGTCAGGAGAGGCGCAGATAGAGCAGAAATCTAT
AGCCTTGCCTTTTCTTCAACTGCACAATGGCTAGCTGTTTCCAGTGATAAAGGAACTGTC
CATGTGTTCAATCTAAAGGTTGATTCAGCAGCTTTAGGAGTTGATAGACCAAGAGGGGCA
TCTGAGTCAAATGCTACATCTCCATCAGCTGTGTCTCATCTCTCCTTCATTAGAGGTGTG
CTACCAAAGTATTTCAGCTCTGAGTGGTCTGTGGCGCAGTTCCGATTGCCAGAAGGTCTG
CAGCACATTGTGGCCTTTGGCCACCAAAAGAATACTGTTGTGATTCTTGGCATGGATGGC
AGTTTCTACCGATGCCAGTTTGATGCAGCAGCTGGTGGGGAGATGACCCTGTTGGAACAT
CACAGTTTCTTAAAGCCAGAGGAGAACTTCTAA

Peptide Sequence

PEP ID

XP_016509716.1
PEP Infomation

PREDICTED: autophagy-related protein 18a-like [Nicotiana tabacum]
Sequence

MTSALPSSSPWPDSNPFVSPHMSENSPQALESGDRSFLSDLSDISSAITAATADDDEHRA
ETSVTSPAAAATTTTVQNINPNPTSISLPVDSSTPNILYLSFNQDHGCFAAGTDRGFRIY
NCDPLREIFRRDFAGNANGGGGICVVQMLFRCNILALVGGGPEPQYPLNKVMIWDDHQSR
CIGELSFRSEVKSVRLRRDRIVVVLAQKIFVYNFADLKLLHQIETVANPKGLCEVSQVSG
SMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRTVCFALTNDGRLLATASSKGTLVRVFN
TLDGSLVQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFNLKVDSAALGVDRPRGA
SESNATSPSAVSHLSFIRGVLPKYFSSEWSVAQFRLPEGLQHIVAFGHQKNTVVILGMDG
SFYRCQFDAAAGGEMTLLEHHSFLKPEENF

Transcript Sequence

Gene sequence data has not been registered.